Stem-loop pab-MIR3693g

Accession

MI0037065

Description

Picea abies pab-MIR3693g precursor miRNA

Sequence

20069 reads, 786.0 reads per million, 100 experiments

cucucacaguuggugcucUUGAACUGCUUAUAGAUGGGCgcugcucagaggccuuaaucaaacacuucggcagauuuguuuguugaauauacaagcccccauuaaugagaaaaaacCCAUCUAUCAGCAGUUCAAGAccacccuaaggg
((((...((..((((.((((((((((((.(((((((((.....(((((.(((.((((.((((((..((....))..))))))))))........))).)......))))......))))))))).)))))))))))).)))))).))))

Structure

    cac  uu    c            U         -Cgcug    ------ a   -------c    u      cu  g 
cucu   ag  ggug ucUUGAACUGCU AUAGAUGGG      cuca      g ggc        uuaa caaaca  uc g
||||   ||  |||| |||||||||||| |||||||||      ||||      | |||        |||| ||||||  ||  
ggga   uc  ccac AGAACUUGACGA UAUCUACCc      gagu      c ccg        aguu guuugu  ag c
    --a  --    c            C         aaaaaa    aauuac c   aacauaua    -      uu  a 

Annotation confidence High

Genome context

MA_7702512: 205-353 [+]

Mature pab-miR3693g-5p

• Accession: MIMAT0045163
• Description: Picea abies pab-miR3693g-5p mature miRNA
• Sequence: 19 - UUGAACUGCUUAUAGAUGGGC - 39
• Evidence: experimental ; Illumina [1]

Mature pab-miR3693g-3p

• Accession: MIMAT0057809
• Description: Picea abies pab-miR3693g-3p mature miRNA
• Sequence: 117 - CCAUCUAUCAGCAGUUCAAGA - 137
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918