Stem-loop pab-MIR11564b

Accession

MI0037068

Description

Picea abies pab-MIR11564b precursor miRNA

Sequence

37539 reads, 1268.0 reads per million, 102 experiments

aucagcaaauggaaguccacagauUUGACCACAAAAUCCACAUUGuccucuggguuuuguuuucagaggaaaaaaaaagagucucaaUGUGGAUAUUGGGGUCAAAUCuaugggguuuccaucuacugau
(((((...((((((.((((.((((((((((.(((.(((((((((((((((((((.......)))))))))..............)))))))))).))).)))))))))).))))..))))))...)))))

Structure

     caa      -g    c          A   A          --------------         uu 
aucag   auggaa  ucca agauUUGACC CAA AUCCACAUUG              uccucuggg  u
|||||   ||||||  |||| |||||||||| ||| ||||||||||              |||||||||  u
uaguc   uaccuu  gggu uCUAAACUGG GUU UAGGUGUaac              aggagacuu  g
     auc      ug    a          G   A          ucugagaaaaaaaa         uu 

Annotation confidence High

Genome context

MA_96247: 7253-7382 [-]

Mature pab-miR11564b-5p

• Accession: MIMAT0045166
• Description: Picea abies pab-miR11564b-5p mature miRNA
• Sequence: 25 - UUGACCACAAAAUCCACAUUG - 45
• Evidence: experimental ; Illumina [1]

Mature pab-miR11564b-3p

• Accession: MIMAT0057812
• Description: Picea abies pab-miR11564b-3p mature miRNA
• Sequence: 88 - UGUGGAUAUUGGGGUCAAAUC - 108
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918