Stem-loop pab-MIR11565

Accession

MI0037069

Description

Picea abies pab-MIR11565 precursor miRNA

Sequence

1551 reads, 147.0 reads per million, 72 experiments

acugccucagaggAUCCAAGUCCAAGGUCAACUUuacccacuccucugaaagUUGAGCUUGGCCUUUGAUCCUcugaggcugu
((.(((((((((((((.(((.(((((.((((((((.............)))))))).))))).))).))))))))))))).))

Structure

  u             C   U     G        accca 
ac gccucagaggAUC AAG CCAAG UCAACUUu     c
|| ||||||||||||| ||| ||||| ||||||||     u
ug cggagucUCCUAG UUC GGUUC AGUUgaaa     c
  u             U   C     G        gucuc 

Annotation confidence High

Genome context

MA_6245599: 219-301 [-]

Mature pab-miR11565-5p

• Accession: MIMAT0057813
• Description: Picea abies pab-miR11565-5p mature miRNA
• Sequence: 14 - AUCCAAGUCCAAGGUCAACUU - 34
• Evidence: experimental ; unknown

Mature pab-miR11565-3p

• Accession: MIMAT0045167
• Description: Picea abies pab-miR11565-3p mature miRNA
• Sequence: 53 - UUGAGCUUGGCCUUUGAUCCU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918