Stem-loop pab-MIR11566

Accession

MI0037071

Description

Picea abies pab-MIR11566 precursor miRNA

Sequence

584 reads, 42.0 reads per million, 67 experiments

auuacuaccaggccgaccucuugaacuaaUACAUCAAUUUUAUUACCAGGccaagagguuugcccugguaguaaaaUUGAUGUAUGAGUUCAAGAGGucagcccaguaguaau
((((((((..(((.(((((((((((((.((((((((((((((((((((((.(((.....))).)))))))))))))))))))))).))))))))))))).)))..))))))))

Structure

        ca   c             a                      c   g 
auuacuac  ggc gaccucuugaacu aUACAUCAAUUUUAUUACCAGG caa a
||||||||  ||| ||||||||||||| |||||||||||||||||||||| ||| g
uaaugaug  ccg cuGGAGAACUUGA UAUGUAGUUaaaaugauggucc guu g
        ac   a             G                      c   u 

Annotation confidence Low

Genome context

MA_393914: 1974-2086 [-]

Mature pab-miR11566-5p

• Accession: MIMAT0057815
• Description: Picea abies pab-miR11566-5p mature miRNA
• Sequence: 30 - UACAUCAAUUUUAUUACCAGG - 50
• Evidence: experimental ; unknown

Mature pab-miR11566-3p

• Accession: MIMAT0045169
• Description: Picea abies pab-miR11566-3p mature miRNA
• Sequence: 77 - UUGAUGUAUGAGUUCAAGAGG - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918