Stem-loop pab-MIR11567

Accession

MI0037073

Description

Picea abies pab-MIR11567 precursor miRNA

Sequence

177 reads, 37.0 reads per million, 47 experiments

ugugaguguugaauacuuaaauauuCCUUUGAUAGGCCUGGCAagccuguaccauccuuaaaagcuucgaagagggugguacaggcUUGCCAGGUCUGUUGAAGGAAuauuccaaguuauucgauugucaca
(((((..(((((((((((.((((((((((((((((((((((((((((((((((((((((............))))))))))))))))))))))))))))))))))))))))..))).))))))))..)))))

Structure

     gu        -   -a                                        aaaag 
uguga  guugaaua cuu  aauauuCCUUUGAUAGGCCUGGCAagccuguaccauccuu     c
|||||  |||||||| |||  ||||||||||||||||||||||||||||||||||||||||      
acacu  uagcuuau gaa  uuauAAGGAAGUUGUCUGGACCGUUcggacauggugggag     u
     gu        u   cc                                        aagcu 

Annotation confidence High

Genome context

MA_58122: 2130-2261 [+]

Mature pab-miR11567-5p

• Accession: MIMAT0057817
• Description: Picea abies pab-miR11567-5p mature miRNA
• Sequence: 26 - CCUUUGAUAGGCCUGGCA - 43
• Evidence: experimental ; unknown

Mature pab-miR11567-3p

• Accession: MIMAT0045171
• Description: Picea abies pab-miR11567-3p mature miRNA
• Sequence: 87 - UUGCCAGGUCUGUUGAAGGAA - 107
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918