Stem-loop pab-MIR11570a

Accession

MI0037076

Description

Picea abies pab-MIR11570a precursor miRNA

Sequence

5775 reads, 513.0 reads per million, 100 experiments

cauugUGUCAAAUUAUUCAAGCAAUUUacagcaaugcuagaucggcguuguacaUUGCUUGAGUAACUUGAACACUaug
(((.(((((((.(((((((((((((.((((((...(((.....))))))))).))))))))))))).))).)))).)))

Structure

   u    -   A             U      aau   a 
cau gUGU CAA UUAUUCAAGCAAU Uacagc   gcu g
||| |||| ||| ||||||||||||| ||||||   ||| a
gua CACA GUU AAUGAGUUCGUUa auguug   cgg u
   U    A   C             c      ---   c 

Annotation confidence High

Genome context

MA_9007109: 1053-1131 [+]

Mature pab-miR11570a-5p

• Accession: MIMAT0057818
• Description: Picea abies pab-miR11570a-5p mature miRNA
• Sequence: 6 - UGUCAAAUUAUUCAAGCAAUUU - 27
• Evidence: experimental ; unknown

Mature pab-miR11570a-3p

• Accession: MIMAT0045174
• Description: Picea abies pab-miR11570a-3p mature miRNA
• Sequence: 55 - UUGCUUGAGUAACUUGAACACU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918