Stem-loop pab-MIR11570b

Accession

MI0037077

Description

Picea abies pab-MIR11570b precursor miRNA

Sequence

12282 reads, 1234.0 reads per million, 100 experiments

ucacauugUGUCAAAUUAUUCAAGCAAUUUacagcaaugcuaaaucggcgcuguacaUUGCUUGAGUAACUUGAACACAauaugg
.((.((((((((((.(((((((((((((.((((((...(((.....))))))))).))))))))))))).))).))))))).)).

Structure

u  c       -   A             U      aau   a 
 ca auugUGU CAA UUAUUCAAGCAAU Uacagc   gcu a
 || ||||||| ||| ||||||||||||| ||||||   ||| a
 gu uaACACA GUU AAUGAGUUCGUUa augucg   cgg u
g  a       A   C             c      ---   c 

Annotation confidence High

Genome context

MA_328444: 1890-1974 [+]

Mature pab-miR11570b-5p

• Accession: MIMAT0057819
• Description: Picea abies pab-miR11570b-5p mature miRNA
• Sequence: 9 - UGUCAAAUUAUUCAAGCAAUUU - 30
• Evidence: experimental ; unknown

Mature pab-miR11570b-3p

• Accession: MIMAT0045175
• Description: Picea abies pab-miR11570b-3p mature miRNA
• Sequence: 58 - UUGCUUGAGUAACUUGAACACA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918