Stem-loop pab-MIR11573a

Accession

MI0037081

Description

Picea abies pab-MIR11573a precursor miRNA

Sequence

519 reads, 35.0 reads per million, 78 experiments

ccgguucuuggaccuucggccaaaaUUGGGGAGCGUAUUGUAGAUUgaaaacuuguggauuucagggagugcaguuUUGAAUCUAUAAUACUCUCCACCaguuucggucgaaggcccaagagcugg
(((((((((((.(((((((((.(((((((((((.((((((((((((.((((((...(.((((....)))).))))))).)))))))))))).)))).))))))).))))))))).)))))))))))

Structure

           a         a       -    C            g      ugu g    c 
ccgguucuugg ccuucggcc aaaUUGG GGAG GUAUUGUAGAUU aaaacu   g auuu a
||||||||||| ||||||||| ||||||| |||| |||||||||||| ||||||   | ||||  
ggucgagaacc ggaagcugg uuugaCC CCUC CAUAAUAUCUAA UUuuga   c ugag g
           c         c       A    U            G      --- g    g 

Annotation confidence Low

Genome context

MA_5969311: 914-1039 [-]

Mature pab-miR11573a-5p

• Accession: MIMAT0045179
• Description: Picea abies pab-miR11573a-5p mature miRNA
• Sequence: 26 - UUGGGGAGCGUAUUGUAGAUU - 46
• Evidence: experimental ; Illumina [1]

Mature pab-miR11573a-3p

• Accession: MIMAT0057823
• Description: Picea abies pab-miR11573a-3p mature miRNA
• Sequence: 77 - UUGAAUCUAUAAUACUCUCCACC - 99
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918