Stem-loop pab-MIR11581

Accession

MI0037095

Description

Picea abies pab-MIR11581 precursor miRNA

Sequence

50218 reads, 1278.0 reads per million, 91 experiments

cuuuacuuggCGACUGCAAUGAAUCCAGAGAgcugcucuuuacucgauaaccaagcaguucUUUGGAUUCCUUACAGUAGCCuaguaaag
(((((((.(((.((((.((.(((((((((((((((((................))))))))))))))))).)).)))).))).)))))))

Structure

       u   G    C  U                 cuuuacu 
cuuuacu ggC ACUG AA GAAUCCAGAGAgcugcu       c
||||||| ||| |||| || |||||||||||||||||        
gaaauga CCG UGAC UU CUUAGGUUUcuugacga       g
       u   A    A  C                 accaaua 

Annotation confidence High

Genome context

MA_2365: 57169-57258 [-]

Mature pab-miR11581-5p

• Accession: MIMAT0057828
• Description: Picea abies pab-miR11581-5p mature miRNA
• Sequence: 11 - CGACUGCAAUGAAUCCAGAGA - 31
• Evidence: experimental ; unknown

Mature pab-miR11581-3p

• Accession: MIMAT0045193
• Description: Picea abies pab-miR11581-3p mature miRNA
• Sequence: 62 - UUUGGAUUCCUUACAGUAGCC - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918