Stem-loop pab-MIR11551b

Accession

MI0037097

Description

Picea abies pab-MIR11551b precursor miRNA

Sequence

3506 reads, 148.0 reads per million, 87 experiments

uuuuggguagaggauuuugguaucgauUGCGAGGAAAAGCAAAUCAUGcuccugcugauaaauucaaugaucaagauuucaguaacagcauguuuuguUUUUCCUCCGCAAUUGAUACUGacauauccugccgagga
((((.(((..(((((.(((((((((((((((((((((((((((.((((((..((((((....................))))))..)))))).)))))))))))).)))))))))))))))...)))))))).))))

Structure

    g   ag     --u               -            U      cc      uaaauucaa 
uuuu ggu  aggau   uugguaucgauUGCG AGGAAAAGCAAA CAUGcu  ugcuga         u
|||| |||  |||||   ||||||||||||||| |||||||||||| ||||||  ||||||          
agga ccg  uccua   aGUCAUAGUUAACGC UCCUUUUuguuu guacga  augacu         g
    g   --     uac               C            u      ca      uuagaacua 

Annotation confidence Low

Genome context

MA_250946: 2748-2884 [+]

Mature pab-miR11551b-5p

• Accession: MIMAT0057830
• Description: Picea abies pab-miR11551b-5p mature miRNA
• Sequence: 28 - UGCGAGGAAAAGCAAAUCAUG - 48
• Evidence: experimental ; unknown

Mature pab-miR11551b-3p

• Accession: MIMAT0045195
• Description: Picea abies pab-miR11551b-3p mature miRNA
• Sequence: 99 - UUUUCCUCCGCAAUUGAUACUG - 120
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918