Stem-loop pab-MIR828

Accession

MI0037144

Description

Picea abies pab-MIR828 precursor miRNA

Literature search

1 open access papers mention pab-MIR828
(1 sentences)

Sequence

uUCUUGCUCAAAUGAGUGUUCCAcguaauuuaauauccuaucuuuuggauggaucaauuuauuuuaguuucgucugcaaaacuucagaauuuucagaugauguaacauuaucccgaaagcugcuuuaaauucuuggaaauuuauuguguuuuag
.....(((.(((((((((.((((............(((........))))))).).)))))))).))).(((((((.((((........)))))))))))...............(((((.((..((((((......))))))..)))))))..

Structure

---------------------------------------------------------------------------------uUCUU   C        - U    cguaauuuaaua   uau 
                                                                                      GCU AAAUGAGU G UCCA            ucc   c
                                                                                      ||| |||||||| | ||||            |||    
                                                                                      uga uuuauuua c aggu            agg   u
gauuuuguguuauuuaaagguucuuaaauuucgucgaaagcccuauuacaauguaguagacuuuuaagacuucaaaacgucugcuu   u        a u    ------------   uuu 

Annotation confidence Not enough data

Genome context

MA_8383: 17833-17986 [-]

Mature pab-miR828

• Accession: MIMAT0045246
• Description: Picea abies pab-miR828 mature miRNA
• Sequence: 2 - UCUUGCUCAAAUGAGUGUUCCA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918