Stem-loop cas-MIR158b

Accession

MI0037159

Description

Camelina sativa cas-MIR158b precursor miRNA

Literature search

1 open access papers mention cas-MIR158b
(1 sentences)

Sequence

uucuuugucuacacuuuuggaaagagugaugacgccaucgcuuuuUCCGAAAUGUAGACAAAGCA
..(((((((((((.(((((((((((((((((....))))))))))))))))))))))))))))..

Structure

uu           c                 a 
  cuuugucuaca uuuuggaaagagugaug c
  ||||||||||| |||||||||||||||||  
  GAAACAGAUGU AAAGCCUuuuucgcuac g
AC           -                 c 

Annotation confidence Not enough data

Genome context

chr19: 4419786-4419850 [+]

Mature cas-miR158b

• Accession: MIMAT0045261
• Description: Camelina sativa cas-miR158b mature miRNA
• Sequence: 46 - UCCGAAAUGUAGACAAAGCA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542