Stem-loop cas-MIR827b

Accession

MI0037160

Description

Camelina sativa cas-MIR827b precursor miRNA

Literature search

1 open access papers mention cas-MIR827b
(1 sentences)

Sequence

auuuguugauugacaucuaugcauaucggucauccucguguugaucgauucguUAAGAUGACCAUCAACAAACg
.(((((((((.(.(((((..((..((((((((.........))))))))..))..))))).).)))))))))..

Structure

-a         u a     au  au        ucc 
  uuuguugau g caucu  gc  aucgguca   u
  ||||||||| | |||||  ||  ||||||||   c
  AAACAACUA C GUAGA  ug  uagcuagu   g
gC         C A     AU  cu        ugu 

Annotation confidence Not enough data

Genome context

chr7: 2198467-2198540 [+]

Mature cas-miR827b

• Accession: MIMAT0045262
• Description: Camelina sativa cas-miR827b mature miRNA
• Sequence: 54 - UAAGAUGACCAUCAACAAAC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542