Stem-loop cas-MIR156b

Accession

MI0037163

Description

Camelina sativa cas-MIR156b precursor miRNA

Literature search

1 open access papers mention cas-MIR156b
(4 sentences)

Sequence

aacUGACAGAAGAGAGUGAGCACaugcaggcacuguuaugugucuauaacuuugcgugugcgUGCUCACCUCUCUUUCUGUCAGUu
(((((((((((((((((((((((.((((.(((..((((((....))))))..))).)))).))))))).))))).)))))))))))

Structure

           -     -       a    g   cu      u 
aacUGACAGAA GAGAG UGAGCAC ugca gca  guuaug g
||||||||||| ||||| ||||||| |||| |||  ||||||  
uUGACUGUCUU CUCUC ACUCGUg gugu cgu  caauau u
           U     C       c    g   uu      c 

Annotation confidence Not enough data

Genome context

chr10: 4620080-4620165 [-]

Mature cas-miR156b-5p

• Accession: MIMAT0045266
• Description: Camelina sativa cas-miR156b-5p mature miRNA
• Sequence: 4 - UGACAGAAGAGAGUGAGCAC - 23
• Evidence: experimental ; Illumina [1]

Mature cas-miR156b-3p

• Accession: MIMAT0045267
• Description: Camelina sativa cas-miR156b-3p mature miRNA
• Sequence: 63 - UGCUCACCUCUCUUUCUGUCAGU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542