Stem-loop cas-MIR156g

Accession

MI0037168

Description

Camelina sativa cas-MIR156g precursor miRNA

Literature search

1 open access papers mention cas-MIR156g
(4 sentences)

Sequence

aggcGACAGAAGAGAGUGAGCACacaugguuccuuuuucuagcaugcucaugcucgaaagcucugcgugcuuacucucuucuugucuccu
(((.(((((((((((((((((((.((.(((.....((((.(((((....))))).))))))).)).))))))))))))))).)))).)))

Structure

   c    -               a  u   uccuu    u     g 
agg GACA GAAGAGAGUGAGCAC ca ggu     uuuc agcau c
||| |||| ||||||||||||||| || |||     |||| |||||  
ucc cugu cuucucucauucgug gu ucg     aaag ucgua u
   u    u               c  c   -----    c     c 

Annotation confidence Not enough data

Genome context

chr15: 29810671-29810760 [-]

Mature cas-miR156g

• Accession: MIMAT0045276
• Description: Camelina sativa cas-miR156g mature miRNA
• Sequence: 5 - GACAGAAGAGAGUGAGCAC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542