Stem-loop cas-MIR157c

Accession

MI0037175

Description

Camelina sativa cas-MIR157c precursor miRNA

Literature search

1 open access papers mention cas-MIR157c
(1 sentences)

Sequence

gggagagaaagagaaagagccugcaucuaaucuucuguGCUCUCUAUACUUCUGUCACC
((((.((((..(...(((((..(((..........))))))))...)..)))).)).))

Structure

  -  g    ag gaa     cu   ucua 
gg ga agaa  a   agagc  gca    a
|| || ||||  |   |||||  |||     
CC CU UCUU  U   UCUCG  ugu    u
  A  G    CA AUC     --   cuuc 

Annotation confidence Not enough data

Genome context

chr1: 8089142-8089200 [-]

Mature cas-miR157c

• Accession: MIMAT0045284
• Description: Camelina sativa cas-miR157c mature miRNA
• Sequence: 39 - GCUCUCUAUACUUCUGUCACC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542