Stem-loop cas-MIR164

Accession

MI0037184

Description

Camelina sativa cas-MIR164 precursor miRNA

Literature search

0 open access papers mention cas-MIR164
(0 sentences)

Sequence

guUGGAGAAGCAGGGCACGUGCAaaccaacaaagacgaaauccgucucaugugcuuugcacguacuccccuucuccaac
((((((((((..(((.(((((((((.((....(((((.....)))))....)).))))))))).)))..))))))))))

Structure

          CA   C         c  acaa     a 
guUGGAGAAG  GGG ACGUGCAaa ca    agacg a
||||||||||  ||| ||||||||| ||    ||||| a
caaccucuuc  cuc ugcacguuu gu    ucugc u
          cc   a         c  guac     c 

Annotation confidence Not enough data

Genome context

chr5: 257645-257723 [-]

Mature cas-miR164

• Accession: MIMAT0045295
• Description: Camelina sativa cas-miR164 mature miRNA
• Sequence: 3 - UGGAGAAGCAGGGCACGUGCA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542