Stem-loop cas-MIR166d

Accession

MI0037190

Description

Camelina sativa cas-MIR166d precursor miRNA

Literature search

1 open access papers mention cas-MIR166d
(4 sentences)

Sequence

aaguucagguggaugaugccuggcucgagaccauuccaucucaugacgcugaugaugaugUCGGACCAGGCUUCAUUCCCCUcaacuu
(((((.(((.((((((.((((((.((((.(.(((..((((..........))))))).).)))).)))))).)))))).))).)))))

Structure

     c   u      u      c    g c   uc    ucau 
aaguu agg ggauga gccugg ucga a cau  cauc    g
||||| ||| |||||| |||||| |||| | |||  ||||     
uucaa UCC CUUACU CGGACC GGCU u gua  guag    a
     c   C      U      A    g a   --    ucgc 

Annotation confidence Not enough data

Genome context

chr11: 34137148-34137235 [-]

Mature cas-miR166d

• Accession: MIMAT0045302
• Description: Camelina sativa cas-miR166d mature miRNA
• Sequence: 61 - UCGGACCAGGCUUCAUUCCCCU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542