Stem-loop cas-MIR169d

Accession

MI0037200

Description

Camelina sativa cas-MIR169d precursor miRNA

Literature search

1 open access papers mention cas-MIR169d
(1 sentences)

Sequence

ugagguugagccaaggaugacuugccgauuuuaccaaugaaucugaacugauuuugguguccgGCAAGUUGACCUUGGCUCUGUuuca
(((((..(((((((((..(((((((((....(((((..(((((......))))))))))..)))))))))..)))))))))..)))))

Structure

     uu         au         auuu     au     ug 
ugagg  gagccaagg  gacuugccg    uacca  gaauc  a
|||||  |||||||||  |||||||||    |||||  |||||   
acuuU  CUCGGUUCC  UUGAACGgc    guggu  uuuag  a
     GU         AG         --cu     --     uc 

Annotation confidence Not enough data

Genome context

chr10: 9621277-9621364 [+]

Mature cas-miR169d

• Accession: MIMAT0045313
• Description: Camelina sativa cas-miR169d mature miRNA
• Sequence: 64 - GCAAGUUGACCUUGGCUCUGU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542