Stem-loop cas-MIR170

Accession

MI0037204

Description

Camelina sativa cas-MIR170 precursor miRNA

Sequence

cucugaUAUUGGCCUGGUUCACUCAGAuacuuuuuaaacuaacucaucugauugagccgugucaauaucuaag
((..(((((((((.(((((((.((((((.................)))))).))))))).)))))))))..))

Structure

  cu         C       C      acuuuuu 
cu  gaUAUUGGC UGGUUCA UCAGAu       a
||  ||||||||| ||||||| ||||||       a
ga  cuauaacug gccgagu agucua       a
  au         u       u      cucaauc 

Annotation confidence Not enough data

Genome context

chr2: 29058364-29058436 [+]

Mature cas-miR170

• Accession: MIMAT0045319
• Description: Camelina sativa cas-miR170 mature miRNA
• Sequence: 7 - UAUUGGCCUGGUUCACUCAGA - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542