Stem-loop cas-MIR825

Accession

MI0037235

Description

Camelina sativa cas-MIR825 precursor miRNA

Literature search

1 open access papers mention cas-MIR825
(1 sentences)

Sequence

guUCAAGCACCAGCUCGAAGAAGCguaacuaguuuaucuuaagaaaucauggaucugaaaaagcuacgcuucucgagaaggugcgugagc
(((((.(((((..(((((.((((((((.((..(((((((...........))))..)))..)).)))))))))))))..))))).)))))

Structure

     A     AG     A        a  ag   --    uaag 
guUCA GCACC  CUCGA GAAGCgua cu  uuu  aucu    a
||||| |||||  ||||| |||||||| ||  |||  ||||    a
cgagu cgugg  gagcu cuucgcau ga  aag  uagg    a
     g     aa     -        c  aa   uc    uacu 

Annotation confidence Not enough data

Genome context

chr7: 28990521-28990610 [+]

Mature cas-miR825

• Accession: MIMAT0045358
• Description: Camelina sativa cas-miR825 mature miRNA
• Sequence: 3 - UCAAGCACCAGCUCGAAGAAGC - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542