Stem-loop cas-MIR9560

Accession

MI0037247

Description

Camelina sativa cas-MIR9560 precursor miRNA

Sequence

uugACAGGUGGUGGAACAAAUAUGAGUuuauuauauuaaucagaaaacaaauaaaacucauauuuaguucuaccuccuguuga
((((((((.((((((((((((((((((((........................)))))))))))).)))))))).))))))))

Structure

        U        -            auuauauuaau 
uugACAGG GGUGGAAC AAAUAUGAGUuu           c
|||||||| |||||||| ||||||||||||            
aguugucc ccaucuug uuuauacucaaa           a
        u        a            auaaacaaaag 

Annotation confidence Not enough data

Genome context

chr8: 12077148-12077230 [+]

Mature cas-miR9560

• Accession: MIMAT0045370
• Description: Camelina sativa cas-miR9560 mature miRNA
• Sequence: 4 - ACAGGUGGUGGAACAAAUAUGAGU - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542