Stem-loop cas-MIR11592

Accession

MI0037248

Description

Camelina sativa cas-MIR11592 precursor miRNA

Sequence

aaccgaaccGAACCGAACCGAACCGAAAaaauaacuuuuuccaauuugguauuuuuguauugguauguuugcuuaauuucgguu
(((((((...((.(((((...((((((((((((.((...........)))))))))...)))))..))))).))...)))))))

Structure

       ccG  C     CGA     ---       a  uuuu 
aaccgaa   AA CGAAC   ACCGA   AAaaaua cu    c
|||||||   || |||||   |||||   ||||||| ||    c
uuggcuu   uu guuug   ugguu   uuuuuau gg    a
       uaa  c     -ua     aug       -  uuua 

Annotation confidence Not enough data

Genome context

chr14: 12458730-12458813 [+]

Mature cas-miR11592

• Accession: MIMAT0045371
• Description: Camelina sativa cas-miR11592 mature miRNA
• Sequence: 10 - GAACCGAACCGAACCGAAA - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542