Stem-loop tca-mir-11615

Accession

MI0037347

Description

Tribolium castaneum tca-mir-11615 precursor miRNA

Sequence

acacuuacgacgauuCGUCCUUUUCGGACUCGGACUacuccggcgaugaGUCCGAGUCCGAAUGGGGCGGAcugcguaucgaa
.....((((.((.((((((((.((((((((((((((..((....))..)))))))))))))).)))))))).)))))).....

Structure

acacu    a  a        U              ac  c 
     uacg cg uuCGUCCU UUCGGACUCGGACU  uc g
     |||| || |||||||| ||||||||||||||  ||  
     augc gu AGGCGGGG AAGCCUGAGCCUGa  ag g
aagcu    -  c        U              gu  c 

Annotation confidence Not enough data

Genome context

ChLGX: 6868071-6868153 [+]

Mature tca-miR-11615-5p

• Accession: MIMAT0045470
• Description: Tribolium castaneum tca-miR-11615-5p mature miRNA
• Sequence: 16 - CGUCCUUUUCGGACUCGGACU - 36
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11615-3p

• Accession: MIMAT0045471
• Description: Tribolium castaneum tca-miR-11615-3p mature miRNA
• Sequence: 50 - GUCCGAGUCCGAAUGGGGCGGA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96