miRBase entry: tca-mir-11615

Stem-loop tca-mir-11615


Accession
MI0037347
Description
Tribolium castaneum tca-mir-11615 precursor miRNA


Sequence

acacuuacgacgauuCGUCCUUUUCGGACUCGGACUacuccggcgaugaGUCCGAGUCCGAAUGGGGCGGAcugcguaucgaa
.....((((.((.((((((((.((((((((((((((..((....))..)))))))))))))).)))))))).)))))).....

Structure
acacu    a  a        U              ac  c 
     uacg cg uuCGUCCU UUCGGACUCGGACU  uc g
     |||| || |||||||| ||||||||||||||  ||  
     augc gu AGGCGGGG AAGCCUGAGCCUGa  ag g
aagcu    -  c        U              gu  c 


Annotation confidence Not enough data
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Genome context
ChLGX: 6868071-6868153 [+]

Database links

Mature tca-miR-11615-5p

Accession MIMAT0045470
Description Tribolium castaneum tca-miR-11615-5p mature miRNA
Sequence 16 - CGUCCUUUUCGGACUCGGACU - 36
Evidence experimental
Illumina [1]

Mature tca-miR-11615-3p

Accession MIMAT0045471
Description Tribolium castaneum tca-miR-11615-3p mature miRNA
Sequence 50 - GUCCGAGUCCGAAUGGGGCGGA - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96