miRBase entry: 26518483

MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum

PubMed ID 26518483
Authors "Ninova M, Ronshaugen M, Griffiths-Jones S"
Journal "Genome Res
Volume 26
Pages 85-96

There are 123 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
tca-mir-3851d-1 MI0016337 None ref|NC_007421.3| 9847253 9847343 - High
tca-mir-3851m-1 MI0037345 None ref|NC_007425.3| 6419516 6419621 + High
tca-mir-11614 MI0037346 None ref|NC_007416.3| 4434353 4434504 + High
tca-mir-11615 MI0037347 None ref|NC_007416.3| 7989318 7989400 - -
tca-mir-3806b-1 MI0037348 None ref|NC_007416.3| 6596552 6596649 + High
tca-mir-3806b-2 MI0037349 None ref|NC_007416.3| 6596877 6596970 + High
tca-mir-3806b-3 MI0037350 None ref|NC_007416.3| 6597168 6597341 + High
tca-mir-3806b-4 MI0037351 None ref|NC_007416.3| 6597854 6597979 + High
tca-mir-11617b MI0037352 None ref|NC_007417.3| 342463 342557 - -
tca-mir-3851l-1 MI0037353 None ref|NC_007417.3| 344901 344992 - -
tca-mir-11617c MI0037354 None ref|NC_007417.3| 364042 364136 - -
tca-mir-3836c-1 MI0037355 None ref|NC_007417.3| 364436 364527 - -
tca-mir-3851n-1 MI0037356 None ref|NC_007417.3| 369992 370097 - Medium
tca-mir-11617a-1 MI0037357 None ref|NC_007417.3| 1150624 1150716 + High
tca-mir-3836d MI0037358 None ref|NC_007417.3| 1149341 1149431 + -
tca-mir-3836c-2 MI0037359 None ref|NC_007417.3| 1147827 1147918 + -
tca-mir-11618a-1 MI0037360 None ref|NC_007417.3| 1147074 1147166 + High
tca-mir-3851o-2 MI0037361 None ref|NC_007417.3| 1146617 1146708 + -
tca-mir-3851k-1 MI0037362 None ref|NC_007417.3| 1145301 1145392 + -
tca-mir-11618b-1 MI0037363 None ref|NC_007417.3| 1144878 1144972 + High
tca-mir-3836e MI0037364 None ref|NC_007417.3| 1144345 1144421 + -
tca-mir-11619e MI0037365 None ref|NC_007417.3| 1144029 1144130 + -
tca-mir-3836c-3 MI0037366 None ref|NC_007417.3| 1143921 1144012 + -
tca-mir-11618a-4 MI0037367 None ref|NC_007417.3| 1143163 1143247 + -
tca-mir-3851o-1 MI0037368 None ref|NC_007417.3| 1142710 1142801 + -
tca-mir-3851l-2 MI0037369 None ref|NC_007417.3| 1141429 1141520 + -
tca-mir-11618b-2 MI0037370 None ref|NC_007417.3| 1141010 1141104 + High
tca-mir-3836f MI0037371 None ref|NC_007417.3| 1140465 1140541 + High
tca-mir-11619f MI0037372 None ref|NC_007417.3| 1139919 1140012 + Medium
tca-mir-11620 MI0037373 None ref|NC_007417.3| 8614654 8614771 + High
tca-mir-3851k-2 MI0037374 None ref|NC_007417.3| 371005 371096 + -
tca-mir-11619b MI0037375 None ref|NC_007417.3| 371717 371808 + -
tca-mir-11621-1 MI0037376 None ref|NC_007417.3| 372106 372200 + -
tca-mir-11619a-3 MI0037377 None ref|NC_007417.3| 374303 374389 + High
tca-mir-11617a-2 MI0037378 None ref|NC_007417.3| 374437 374529 + High
tca-mir-11622 MI0037379 None ref|NC_007418.3| 1789919 1790006 - High
tca-mir-11623 MI0037380 None ref|NC_007420.3| 11627642 11627707 - High
tca-mir-3851g-1 MI0037381 None ref|NC_007420.3| 48466 48556 - High
tca-mir-11624a-1 MI0037382 None ref|NC_007420.3| 48815 48906 - High
tca-mir-11624a-2 MI0037383 None ref|NC_007420.3| 505616 505754 + High
tca-mir-11624a-3 MI0037384 None ref|NC_007420.3| 505236 505340 + High
tca-mir-309c MI0037385 None ref|NC_007420.3| 7457318 7457406 + High
tca-mir-11624b-1 MI0037386 None ref|NC_007421.3| 9847516 9847607 - High
tca-mir-3851h MI0037387 None ref|NC_007421.3| 9956948 9957037 - -
tca-mir-11624d MI0037388 None ref|NC_007421.3| 9958303 9958394 - High
tca-mir-3851i MI0037389 None ref|NC_007421.3| 272905 272996 - -
tca-mir-3851j MI0037390 None ref|NC_007421.3| 273008 273102 - High
tca-mir-11625a MI0037391 None ref|NC_007421.3| 273130 273244 - High
tca-mir-11626a MI0037392 None ref|NC_007421.3| 273336 273499 - High
tca-mir-11626b MI0037393 None ref|NC_007421.3| 9853114 9853220 + High
tca-mir-11624c MI0037394 None ref|NC_007421.3| 9853261 9853352 + High
tca-mir-11627 MI0037395 None ref|NC_007422.5| 9859703 9859794 + High
tca-mir-11628 MI0037396 None ref|NC_007424.3| 11124288 11124382 - Medium
tca-mir-11629 MI0037397 None ref|NW_015451937.1| 924329 924425 + -
tca-mir-11630 MI0037398 None ref|NC_007416.3| 3971230 3971321 - High
tca-mir-3851n-2 MI0037399 None ref|NW_015450871.1| 10385 10490 - Medium
tca-mir-3851l-3 MI0037400 None ref|NW_015450871.1| 1566 1681 - High
tca-mir-3851k-3 MI0037401 None ref|NW_015450993.1| 11048 11139 - -
tca-mir-11618b-3 MI0037402 None ref|NW_015450993.1| 11468 11562 - High
tca-mir-11618a-3 MI0037403 None ref|NW_015450993.1| 11866 11958 - High
tca-mir-3851m-3 MI0037404 None ref|NW_015450993.1| 12024 12117 - High
tca-mir-11617a-3 MI0037405 None ref|NW_015450993.1| 7787 7879 - High
tca-mir-11619a-1 MI0037406 None ref|NW_015450993.1| 7927 8013 - High
tca-mir-3851m-2 MI0037407 None ref|NW_015450993.1| 24381 24472 + High
tca-mir-11618b-4 MI0037408 None ref|NW_015450993.1| 25826 25920 + High
tca-mir-3851k-4 MI0037409 None ref|NW_015450993.1| 26251 26342 + -
tca-mir-11619a-2 MI0037410 None ref|NW_015450993.1| 29377 29463 + High
tca-mir-11617a-4 MI0037411 None ref|NW_015450993.1| 29511 29603 + High
tca-mir-11618a-2 MI0037412 None ref|NW_015450635.1| 4367 4463 - High
tca-mir-971b MI0037413 None ref|NC_007419.2| 238953 239060 + High
tca-mir-11619c MI0037414 None ref|NC_007417.3| 342750 342849 - -
tca-mir-11619d MI0037415 None ref|NC_007417.3| 364327 364419 - -
tca-mir-3851q MI0037416 None ref|NC_007417.3| 1142993 1143100 + -
tca-mir-11625b MI0037417 None ref|NC_007420.3| 48703 48800 - High
tca-mir-3851g-2 MI0037418 None ref|NC_007420.3| 505991 506067 + -
tca-mir-11631 MI0037419 None ref|NC_007420.3| 15277518 15277616 + Medium
tca-mir-3858a-2 MI0037420 None ref|NC_007421.3| 9957903 9958017 - High
tca-mir-3851d-2 MI0037421 None ref|NC_007421.3| 9958019 9958109 - High
tca-mir-3858b MI0037422 None ref|NC_007421.3| 272806 272896 - -
tca-mir-11632 MI0037423 None ref|NC_007421.3| 9768231 9768388 + High
tca-mir-11633 MI0037424 None ref|NC_007424.3| 5594562 5594620 - Medium
tca-mir-3836g-1 MI0037425 None ref|NW_015450993.1| 8038 8128 - High
tca-mir-3851m-4 MI0037426 None ref|NW_015450635.1| 13133 13208 - -
tca-mir-3851r MI0037427 None ref|NW_015450635.1| 4524 4597 - Medium
tca-mir-3836c-4 MI0037428 None ref|NC_007417.3| 342885 342945 - -
tca-mir-11634 MI0037429 None ref|NC_007423.3| 13297445 13297513 + -
tca-mir-3836c-5 MI0037430 None ref|NW_015450635.1| 4155 4215 - -
tca-mir-11635 MI0037431 None ref|NC_007416.3| 6586743 6586801 + -
tca-mir-11636 MI0037432 None ref|NC_007416.3| 6593233 6593289 + High
tca-mir-3806c MI0037433 None ref|NC_007416.3| 6597563 6597623 + -
tca-mir-11637 MI0037434 None ref|NC_007416.3| 8610316 8610394 - -
tca-mir-11638 MI0037435 None ref|NC_007416.3| 6699613 6699683 - -
tca-mir-3836h MI0037436 None ref|NC_007417.3| 356331 356388 + -
tca-mir-11639 MI0037437 None ref|NC_007417.3| 357297 357355 + -
tca-mir-11617d-1 MI0037438 None ref|NC_007417.3| 372275 372334 + High
tca-mir-11617e MI0037439 None ref|NC_007417.3| 343093 343152 - High
tca-mir-11617f-1 MI0037440 None ref|NC_007417.3| 1146293 1146351 + High
tca-mir-3836i-1 MI0037441 None ref|NC_007417.3| 1141776 1141835 + -
tca-mir-11617f-2 MI0037442 None ref|NC_007417.3| 1142386 1142444 + High
tca-mir-3836i-2 MI0037443 None ref|NC_007417.3| 1145669 1145728 + -
tca-mir-11641 MI0037444 None ref|NC_007418.3| 531059 531116 + -
tca-mir-276b MI0037445 None ref|NC_007418.3| 12483940 12483999 + High
tca-mir-3851g-3 MI0037446 None ref|NC_007421.3| 9853632 9853689 + -
tca-mir-11642 MI0037447 None ref|NC_007421.3| 272709 272768 - High
tca-mir-11624b-2 MI0037448 None ref|NC_007421.3| 9957245 9957305 - -
tca-mir-11643 MI0037449 None ref|NC_007422.5| 3258740 3258802 - -
tca-mir-6016b MI0037450 None ref|NC_007422.5| 15267899 15267956 - Medium
tca-mir-11644 MI0037451 None ref|NC_007423.3| 643912 643969 - Medium
tca-mir-307b MI0037452 None ref|NC_007423.3| 13556468 13556525 - High
tca-mir-927c MI0037453 None ref|NC_007424.3| 12073271 12073329 - High
tca-mir-11645 MI0037454 None ref|NC_007425.3| 2519989 2520053 - -
tca-mir-11646 MI0037455 None ref|NW_015451780.1| 36475 36566 - Medium
tca-mir-11647 MI0037456 None ref|NW_015452276.1| 250535 250603 + Medium
tca-mir-11648 MI0037457 None ref|NW_015450211.1| 1140 1212 + Medium
tca-mir-3851p MI0037458 None ref|NW_015450993.1| 22963 23023 + -
tca-mir-11617d-2 MI0037459 None ref|NW_015450993.1| 9815 9874 - High
tca-mir-3836j MI0037460 None ref|NW_015450993.1| 27860 27918 + -
tca-mir-11617d-3 MI0037461 None ref|NW_015450993.1| 27516 27575 + High
tca-mir-11649 MI0037462 None ref|NC_007419.2| 7128351 7128411 - -
tca-mir-11650 MI0037463 None ref|NC_007419.2| 10808402 10808463 - -
tca-mir-11618a-5 MI0037639 None ref|NW_015450993.1| 11869 11955 - High
tca-mir-3836g-2 MI0037640 None ref|NW_015450993.1| 8045 8121 - High
tca-mir-3851l-4 MI0037641 None ref|NW_015450635.1| 8276 8336 - -



Comments or questions? Email mirbase@gmail.com