Stem-loop tca-mir-3836g-1

Accession

MI0037425

Description

Tribolium castaneum tca-mir-3836g-1 precursor miRNA

Sequence

uuuuugaaaugucugucAGGUCUACCUCUGCUUAAGUUGAUAuuuauuuaauuaUCACUGGGCAAGGUAGACUCUacagccguuucuucaa
.....((((((.((((..(((((((((.((((((.((.((((..........)))))))))))))))))))))..)))).)))))).....

Structure

uuuuu      u    cA         C      A  U    uuua 
     gaaaug cugu  GGUCUACCU UGCUUA GU GAUA    u
     |||||| ||||  ||||||||| |||||| || ||||     
     cuuugc gaca  UCAGAUGGA ACGGGU CA CUau    u
aacuu      c    UC         -      -  -    uaau 

Annotation confidence Not enough data

Genome context

Unmapped58: 8038-8128 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from tca-mir-3836g-1

Mature tca-miR-3836g-5p

• Accession: MIMAT0045583
• Description: Tribolium castaneum tca-miR-3836g-5p mature miRNA
• Sequence: 18 - AGGUCUACCUCUGCUUAAGUUGAUA - 42
• Evidence: experimental ; Illumina [1]

Mature tca-miR-3836g-3p

• Accession: MIMAT0045584
• Description: Tribolium castaneum tca-miR-3836g-3p mature miRNA
• Sequence: 55 - UCACUGGGCAAGGUAGACUCU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96