Stem-loop tca-mir-11638

Accession

MI0037435

Description

Tribolium castaneum tca-mir-11638 precursor miRNA

Sequence

ugaaaucgugcauguuucuguaauguugguugcauagcaaaaccauuUCAGGGCAUGACACGGGUUCGAGu
((((.(((((((((((.(((.((((....((((...))))...)))).))))))))).))))).))))...

Structure

---    a     -      u   u    uugg    a 
   ugaa ucgug cauguu cug aaug    uugc  
   |||| ||||| |||||| ||| ||||    |||| u
   GCUU GGCAC GUACGG GAC uuac    aacg  
uGA    G     A      -   U    -caa    a 

Annotation confidence Not enough data

Genome context

ChLGX: 5682408-5682478 [+]

Mature tca-miR-11638-3p

• Accession: MIMAT0045595
• Description: Tribolium castaneum tca-miR-11638-3p mature miRNA
• Sequence: 48 - UCAGGGCAUGACACGGGUUCGAG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96