Stem-loop tca-mir-11643

Accession

MI0037449

Description

Tribolium castaneum tca-mir-11643 precursor miRNA

Sequence

UGGGGCUGUCGGUGCACGGCUCgcaaauaaaaguaguGUCGUUGCGCCGGAAGCCCCGGGggc
(((((((.((((((((((((.(((........)).).)))).)))))))).))))))).....

Structure

-----       G        -    U -  aaa 
     UGGGGCU UCGGUGCA CGGC C gc   u
     ||||||| |||||||| |||| | ||    
     GCCCCGA GGCCGCGU GCUG g ug   a
cggGG       A        U    u a  aaa 

Annotation confidence Not enough data

Genome context

ChLG7: 3251268-3251330 [+]

Mature tca-miR-11643-5p

• Accession: MIMAT0045608
• Description: Tribolium castaneum tca-miR-11643-5p mature miRNA
• Sequence: 1 - UGGGGCUGUCGGUGCACGGCUC - 22
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11643-3p

• Accession: MIMAT0045609
• Description: Tribolium castaneum tca-miR-11643-3p mature miRNA
• Sequence: 38 - GUCGUUGCGCCGGAAGCCCCGGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96