miRBase entry: tca-mir-3851g-3

Stem-loop tca-mir-3851g-3


Accession
MI0037446
Description
Tribolium castaneum tca-mir-3851g-3 precursor miRNA


Sequence

uugacauggggugguacuguguaauuuuugacucaUAGUACGACCCAUGUUGGCUCAg
..((((((((.(.((((((((............)))))))).))))))))).......

Structure
-----uu        g g        uaauu 
       gacauggg u guacugug     u
       |||||||| | ||||||||      
       UUGUACCC A CAUGAUac     u
gACUCGG        - G        ucagu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ChLG6: 8825859-8825916 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from tca-mir-3851g-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tca-miR-3851g-3p

Accession MIMAT0045522
Description Tribolium castaneum tca-miR-3851g-3p mature miRNA
Sequence 36 - UAGUACGACCCAUGUUGGCUCA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96