Stem-loop tca-mir-11619d

Accession

MI0037415

Description

Tribolium castaneum tca-mir-11619d precursor miRNA

Sequence

aaacuaucggaugagagaUGAUAGUCUGCGAUAUUCUUCAUUUuauaauuuaacaaAUGAAGAACCUCAGACUUGGUCuuaggcucgauugcu
.....(((((.(..(((((.(.((((((.(...((((((((((...........)))))))))).).))))))).)))))..).)))))....

Structure

aaacu     a ga     G U      C AUA          uaua 
     aucgg u  gagaU A AGUCUG G   UUCUUCAUUU    a
     ||||| |  ||||| | |||||| |   ||||||||||    u
     uagcu g  uuCUG U UCAGAC C   AAGAAGUAaa    u
-ucgu     c ga     G -      U --C          caau 

Annotation confidence Not enough data

Genome context

ChLG2: 1355663-1355755 [-]

Clustered miRNAs

11 other miRNAs are < 10 kb from tca-mir-11619d

Mature tca-miR-11619d-5p

• Accession: MIMAT0045565
• Description: Tribolium castaneum tca-miR-11619d-5p mature miRNA
• Sequence: 19 - UGAUAGUCUGCGAUAUUCUUCAUUU - 43
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11619d-3p

• Accession: MIMAT0045566
• Description: Tribolium castaneum tca-miR-11619d-3p mature miRNA
• Sequence: 57 - AUGAAGAACCUCAGACUUGGUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96