Stem-loop tca-mir-3851g-1

Accession

MI0037381

Description

Tribolium castaneum tca-mir-3851g-1 precursor miRNA

Sequence

aauuaaauuuaauacugAGUGGACAUGGGGUGAUACUGUGuaauuuuugacucaUAGUACGACCCAUGUUGGCUCAguaauaaauuacauu
.....((((((.((((((((.((((((((..(.(((((((............))))))))..)))))))).)))))))).)))))).....

Structure

aauua      a        G        GU A       uaauu 
     aauuua uacugAGU GACAUGGG  G UACUGUG     u
     |||||| |||||||| ||||||||  | |||||||      
     uuaaau augACUCG UUGUACCC  C AUGAUac     u
uuaca      a        G        AG -       ucagu 

Annotation confidence Not enough data

Genome context

ChLG5: 208780-208870 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from tca-mir-3851g-1

Mature tca-miR-3851g-5p

• Accession: MIMAT0045521
• Description: Tribolium castaneum tca-miR-3851g-5p mature miRNA
• Sequence: 18 - AGUGGACAUGGGGUGAUACUGUG - 40
• Evidence: experimental ; Illumina [1]

Mature tca-miR-3851g-3p

• Accession: MIMAT0045522
• Description: Tribolium castaneum tca-miR-3851g-3p mature miRNA
• Sequence: 55 - UAGUACGACCCAUGUUGGCUCA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96