Stem-loop tca-mir-11623

Accession

MI0037380

Description

Tribolium castaneum tca-mir-11623 precursor miRNA

Sequence

acACUCGCGUCCGAACGAUCACGGCGgaggguugauuucgCCGGAUCGGCUCAUGGACGUGGACga
....(((((((((..(((((.((((((((......))))))))))))).....)))))))))....

Structure

acAC         ---AA     A        gg 
    UCGCGUCCG     CGAUC CGGCGgag  u
    |||||||||     ||||| ||||||||   
    GGUGCAGGU     GCUAG GCCgcuuu  u
agCA         ACUCG     -        ag 

Annotation confidence Not enough data

Genome context

ChLG5: 11212467-11212532 [-]

Mature tca-miR-11623-5p

• Accession: MIMAT0045519
• Description: Tribolium castaneum tca-miR-11623-5p mature miRNA
• Sequence: 3 - ACUCGCGUCCGAACGAUCACGGCG - 26
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11623-3p

• Accession: MIMAT0045520
• Description: Tribolium castaneum tca-miR-11623-3p mature miRNA
• Sequence: 41 - CCGGAUCGGCUCAUGGACGUGGAC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96