miRBase entry: tca-mir-11644

Stem-loop tca-mir-11644


Accession
MI0037451
Description
Tribolium castaneum tca-mir-11644 precursor miRNA


Sequence

UGUUACGUCCAAGGCGUCGGUAaguaaauuaggcgUCGACGCCUUGGACGUAGGAACc
(.((((((((((((((((((...((.......)).)))))))))))))))))).)...

Structure
--- G                  UAa  aa 
   U UUACGUCCAAGGCGUCGG   gu  a
   | ||||||||||||||||||   ||  u
   A GAUGCAGGUUCCGCAGCU   cg  u
cCA G                  --g  ga 


Annotation confidence Not enough data
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Genome context
ChLG8: 338527-338584 [-]

Database links

Mature tca-miR-11644-5p

Accession MIMAT0045612
Description Tribolium castaneum tca-miR-11644-5p mature miRNA
Sequence 1 - UGUUACGUCCAAGGCGUCGGUA - 22
Evidence experimental
Illumina [1]

Mature tca-miR-11644-3p

Accession MIMAT0045613
Description Tribolium castaneum tca-miR-11644-3p mature miRNA
Sequence 36 - UCGACGCCUUGGACGUAGGAAC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96