Stem-loop tca-mir-11624b-1

Accession

MI0037386

Description

Tribolium castaneum tca-mir-11624b-1 precursor miRNA

Sequence

uaauagauuggaguaaaAUUGAGACUUUAGCAUUUUCAUGcaauuuauaucaacaUGAUGUGCUAAAGUGUCGGUUUuacaacaaucacaaa
.....(((((..((((((((((.((((((((((..(((((.............))))).)))))))))).))))))))))..))))).....

Structure

uaaua     ga          G          UU     caauu 
     gauug  guaaaAUUGA ACUUUAGCAU  UCAUG     u
     |||||  |||||||||| ||||||||||  |||||     a
     cuaac  cauUUUGGCU UGAAAUCGUG  AGUac     u
aaaca     aa          G          -U     aacua 

Annotation confidence Not enough data

Genome context

ChLG6: 8819743-8819834 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from tca-mir-11624b-1

Mature tca-miR-11624b-5p

• Accession: MIMAT0045528
• Description: Tribolium castaneum tca-miR-11624b-5p mature miRNA
• Sequence: 18 - AUUGAGACUUUAGCAUUUUCAUG - 40
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11624b-3p

• Accession: MIMAT0045529
• Description: Tribolium castaneum tca-miR-11624b-3p mature miRNA
• Sequence: 56 - UGAUGUGCUAAAGUGUCGGUUU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96