miRBase entry: tca-mir-6016b

Stem-loop tca-mir-6016b

Accession

MI0037450

Description

Tribolium castaneum tca-mir-6016b precursor miRNA

Sequence

AGGAGGACUUGUGGGCGUGGCAuugccgaauAACCACGACCACAUGUUCUUCUacucu
((((((((.(((((.(((((.(((....)))..))))).))))).)))))))).....

Structure

-----        U     G     -C   g 
     AGGAGGAC UGUGG CGUGG  Auu c
     |||||||| ||||| |||||  |||  
     UCUUCUUG ACACC GCACC  uaa c
ucuca        U     A     AA   g

Annotation confidence Not enough data

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Genome context

ChLG7: 14528171-14528228 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tca-mir-6016b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-6016b-5p

Accession	MIMAT0045610
Description	Tribolium castaneum tca-miR-6016b-5p mature miRNA
Sequence	1 - AGGAGGACUUGUGGGCGUGGCA - 22
Evidence	experimental Illumina [1]

Mature tca-miR-6016b-3p

Accession	MIMAT0045611
Description	Tribolium castaneum tca-miR-6016b-3p mature miRNA
Sequence	32 - AACCACGACCACAUGUUCUUCU - 53
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96