miRBase entry: tca-mir-3851p

Stem-loop tca-mir-3851p

Accession

MI0037458

Description

Tribolium castaneum tca-mir-3851p precursor miRNA

Sequence

gGGUUAGCAUAAGUGGUACCauaaaaauuuuuaauccaUAGUACGACAAUGCCAACUCAGu
(((((.((((..((.((((.....................)))).)).)))).)))))...

Structure

---     A    AA  G    Cauaaaaau 
   gGGUU GCAU  GU GUAC         u
   ||||| ||||  || ||||         u
   CUCAA CGUA  CA CAUG         u
uGA     C    -A  G    AUaccuaau

Annotation confidence Not enough data

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Genome context

Unmapped58: 22963-23023 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from tca-mir-3851p

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-3851p-5p

Accession	MIMAT0045624
Description	Tribolium castaneum tca-miR-3851p-5p mature miRNA
Sequence	2 - GGUUAGCAUAAGUGGUACC - 20
Evidence	experimental Illumina [1]

Mature tca-miR-3851p-3p

Accession	MIMAT0045625
Description	Tribolium castaneum tca-miR-3851p-3p mature miRNA
Sequence	39 - UAGUACGACAAUGCCAACUCAG - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96