miRBase entry: tca-mir-11624b-2

Stem-loop tca-mir-11624b-2

Accession

MI0037448

Description

Tribolium castaneum tca-mir-11624b-2 precursor miRNA

Sequence

auugggacuuuaccauuuucaugcaauuuauaucaucaUGAUGUGCUAAAGUGUCGGUUUu
(((((.((((((.(((..(((((.............))))).))).)))))).)))))...

Structure

---     g      c   uu     caauu 
   auugg acuuua cau  ucaug     u
   ||||| |||||| |||  |||||     a
   UGGCU UGAAAU GUG  AGUac     u
uUU     G      C   -U     uacua

Annotation confidence Not enough data

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Genome context

ChLG6: 8929472-8929532 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from tca-mir-11624b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-11624b-3p

Accession	MIMAT0045529
Description	Tribolium castaneum tca-miR-11624b-3p mature miRNA
Sequence	39 - UGAUGUGCUAAAGUGUCGGUUU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96