miRBase entry: tca-mir-307b

Stem-loop tca-mir-307b


Accession
MI0037452
Description
Tribolium castaneum tca-mir-307b precursor miRNA


Sequence

142 reads, 2.0 reads per million, 22 experiments
uCACUCAAGGAGGUUGUGAugguacagcaaacacaUCACACCCAGGUUGAGUGAGUCa
((((((((...((.(((((((((.......)).))))))).))...))))))))....

Structure
----        GGA  U       -  ac 
    uCACUCAA   GG UGUGAug gu  a
    ||||||||   || ||||||| ||  g
    AGUGAGUU   CC ACACUac ca  c
aCUG        GGA  C       a  aa 


Annotation confidence High
Do you think this miRNA is real?

Genome context
ref|NC_007423.3|: 13556468-13556525 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from tca-mir-307b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tca-miR-307b-5p

Accession MIMAT0045614
Description Tribolium castaneum tca-miR-307b-5p mature miRNA
Sequence 2 - CACUCAAGGAGGUUGUGA - 19
Evidence experimental
Illumina [1]

Mature tca-miR-307b-3p

Accession MIMAT0045615
Description Tribolium castaneum tca-miR-307b-3p mature miRNA
Sequence 36 - UCACACCCAGGUUGAGUGAGUC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96