Stem-loop tca-mir-11619a-1

Accession

MI0037406

Description

Tribolium castaneum tca-mir-11619a-1 precursor miRNA

Sequence

cuuucgaacggaacaCGAAGUCUGUGAUAUUCUUCAUUuuauaauuuaacaaaUGAAGAGUCAUUGGCUUGGUUuuucguucaacac
.....((((((((.((.(((((.(((((..(((((((((...........)))))))))))))).))))).)).)))))))).....

Structure

cuuuc        c  G     U     AU         uaua 
     gaacggaa aC AAGUC GUGAU  UCUUCAUUu    a
     |||||||| || ||||| |||||  |||||||||    u
     cuugcuuu UG UUCGG UACUG  AGAAGUaaa    u
cacaa        U  G     U     --         caau 

Annotation confidence Not enough data

Genome context

Unmapped58: 7927-8013 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from tca-mir-11619a-1

Mature tca-miR-11619a-5p

• Accession: MIMAT0045515
• Description: Tribolium castaneum tca-miR-11619a-5p mature miRNA
• Sequence: 16 - CGAAGUCUGUGAUAUUCUUCAUU - 38
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11619a-3p

• Accession: MIMAT0045558
• Description: Tribolium castaneum tca-miR-11619a-3p mature miRNA
• Sequence: 54 - UGAAGAGUCAUUGGCUUGGUU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96