Stem-loop tca-mir-11631

Accession

MI0037419

Description

Tribolium castaneum tca-mir-11631 precursor miRNA

Sequence

ggcaaugggagggggauUGGCAGCUGGAGUUGACUCUUGAuggacagccccuagaccACCAAGGGUGGACUUAUGCUGUugauuucccgucacaauauu
.....((((.((((((((((((((..(((((.(((((((.(((.(........).))).))))))).)))))..)))))))))))))).)).)).....

Structure

ggcaa  -  a              UG     G       A   a agc 
     ug gg gggggauUGGCAGC  GAGUU ACUCUUG ugg c   c
     || || ||||||||||||||  ||||| ||||||| ||| |    
     ac cu cccuuuaguUGUCG  UUCAG UGGGAAC Acc g   c
uuaua  a  g              UA     G       C   a auc 

Annotation confidence Not enough data

Genome context

ChLG5: 14715761-14715859 [+]

Mature tca-miR-11631-5p

• Accession: MIMAT0045572
• Description: Tribolium castaneum tca-miR-11631-5p mature miRNA
• Sequence: 18 - UGGCAGCUGGAGUUGACUCUUGA - 40
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11631-3p

• Accession: MIMAT0045573
• Description: Tribolium castaneum tca-miR-11631-3p mature miRNA
• Sequence: 58 - ACCAAGGGUGGACUUAUGCUGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96