Stem-loop tca-mir-11647

Accession

MI0037456

Description

Tribolium castaneum tca-mir-11647 precursor miRNA

Sequence

486 reads, 8.0 reads per million, 30 experiments

cacCCGACACACCAAACUUUUAUUUcuaacacagauaauaaaaauaAAAGUUUGGAGUGUCGGGUGUUa
((((((((((.((((((((((((((................)))))))))))))).))))))))))...

Structure

---          A              cuaacac 
   cacCCGACAC CCAAACUUUUAUUU       a
   |||||||||| ||||||||||||||        
   GUGGGCUGUG GGUUUGAAAauaaa       g
aUU          A              aauaaua 

Annotation confidence Medium

Genome context

ref|NW_015452276.1|: 250535-250603 [+]

Mature tca-miR-11647-5p

• Accession: MIMAT0053511
• Description: Tribolium castaneum tca-miR-11647-5p mature miRNA
• Sequence: 4 - CCGACACACCAAACUUUUAUUU - 25
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11647-3p

• Accession: MIMAT0045621
• Description: Tribolium castaneum tca-miR-11647-3p mature miRNA
• Sequence: 47 - AAAGUUUGGAGUGUCGGGUGUU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96