Stem-loop tca-mir-3851h

Accession

MI0037387

Description

Tribolium castaneum tca-mir-3851h precursor miRNA

Sequence

3011 reads, 205.0 reads per million, 33 experiments

aauUAAAUUUAAUAUUGAGUGGACAUGGgugguacuguguaauuuuugacucaUAGUACGGUCCAUGUUGGCUCAguaauaaauuacauu
.....((((((.((((((((.(((((((((.((((((((............)))))))).))))))))).)))))))).)))))).....

Structure

aauUA      A        G         g        uaauu 
     AAUUUA UAUUGAGU GACAUGGgu guacugug     u
     |||||| |||||||| ||||||||| ||||||||      
     uuaaau augACUCG UUGUACCUG CAUGAUac     u
uuaca      a        G         G        ucagu 

Annotation confidence Not enough data

Genome context

ref|NC_007421.3|: 9956948-9957037 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from tca-mir-3851h

Mature tca-miR-3851h-5p

• Accession: MIMAT0045530
• Description: Tribolium castaneum tca-miR-3851h-5p mature miRNA
• Sequence: 4 - UAAAUUUAAUAUUGAGUGGACAUGG - 28
• Evidence: experimental ; Illumina [1]

Mature tca-miR-3851h-3p

• Accession: MIMAT0045531
• Description: Tribolium castaneum tca-miR-3851h-3p mature miRNA
• Sequence: 54 - UAGUACGGUCCAUGUUGGCUCA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96