Stem-loop tca-mir-3851h

Accession

MI0037387

Description

Tribolium castaneum tca-mir-3851h precursor miRNA

Sequence

aauuaaauuuaauauugAGUGGACAUGGGUGGUACUGUGUAAuuuuugacucaUAGUACGGUCCAUGUUGGCUCAguaauaaauuacauu
.....((((((.((((((((.(((((((((.((((((((............)))))))).))))))))).)))))))).)))))).....

Structure

aauua      a        G         G        UAAuu 
     aauuua uauugAGU GACAUGGGU GUACUGUG     u
     |||||| |||||||| ||||||||| ||||||||      
     uuaaau augACUCG UUGUACCUG CAUGAUac     u
uuaca      a        G         G        ucagu 

Annotation confidence Not enough data

Genome context

ChLG6: 8929175-8929264 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from tca-mir-3851h

Mature tca-miR-3851h-5p

• Accession: MIMAT0045530
• Description: Tribolium castaneum tca-miR-3851h-5p mature miRNA
• Sequence: 18 - AGUGGACAUGGGUGGUACUGUGUAA - 42
• Evidence: experimental ; Illumina [1]

Mature tca-miR-3851h-3p

• Accession: MIMAT0045531
• Description: Tribolium castaneum tca-miR-3851h-3p mature miRNA
• Sequence: 54 - UAGUACGGUCCAUGUUGGCUCA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96