Stem-loop tca-mir-11629

Accession

MI0037397

Description

Tribolium castaneum tca-mir-11629 precursor miRNA

Sequence

auuaaaugucaacaaucggaUCAUUUUGGACUUUUAUAAACauuaauaaaacagaugUUUAGAAAAGGACAAAUUGACCcgauuauugauauaauau
.....(((((((.((((((.(((.((((..(((((.((((((((.........)))))))).)))))..)))).))).)))))).))))))).....

Structure

auuaa       c      a   U    GA     A        aau 
     augucaa aaucgg UCA UUUG  CUUUU UAAACauu   a
     ||||||| |||||| ||| ||||  ||||| ||||||||   a
     uauaguu uuagcC AGU AAAC  GAAAA AUUUguag   a
uauaa       a      C   U    AG     G        aca 

Annotation confidence Not enough data

Genome context

Unmapped1: 925490-925586 [+]

Mature tca-miR-11629-5p

• Accession: MIMAT0045550
• Description: Tribolium castaneum tca-miR-11629-5p mature miRNA
• Sequence: 21 - UCAUUUUGGACUUUUAUAAAC - 41
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11629-3p

• Accession: MIMAT0045551
• Description: Tribolium castaneum tca-miR-11629-3p mature miRNA
• Sequence: 58 - UUUAGAAAAGGACAAAUUGACC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96