Stem-loop tca-mir-11648

Accession

MI0037457

Description

Tribolium castaneum tca-mir-11648 precursor miRNA

Sequence

UCACAAGAUUGAAUAGGACCGGGCUaagagggucacccugucucacUCCACGGAGCAUCCUUAUCGGUCUUGu
..((((((((((..(((((((((...(((.((.....)).)))....)).)))....))))..))))))))))

Structure

UC          AU    ----   -  -CUa   g  u 
  ACAAGAUUGA  AGGA    CCG GG    aga gg c
  ||||||||||  ||||    ||| ||    ||| || a
  uGUUCUGGCU  UCCU    GGC CC    ucu uc c
--          AU    ACGA   A  Ucac   g  c 

Annotation confidence Not enough data

Genome context

ChLGY: 151574-151646 [+]

Mature tca-miR-11648-5p

• Accession: MIMAT0045622
• Description: Tribolium castaneum tca-miR-11648-5p mature miRNA
• Sequence: 1 - UCACAAGAUUGAAUAGGACCGGGCU - 25
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11648-3p

• Accession: MIMAT0045623
• Description: Tribolium castaneum tca-miR-11648-3p mature miRNA
• Sequence: 47 - UCCACGGAGCAUCCUUAUCGGUCUUG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96