miRBase entry: tca-mir-3836j

Stem-loop tca-mir-3836j

Accession

MI0037460

Description

Tribolium castaneum tca-mir-3836j precursor miRNA

Sequence

ggccucuccuugcuuugguugauauuuauuuaauuaUCACUGGGCAAAGUAGACCCUGc
((..((((.((((((.(((.((((..........))))))))))))).).))).))...

Structure

---  cc   - c      u   u    uuua 
   gg  ucu c uugcuu ggu gaua    u
   ||  ||| | |||||| ||| ||||     
   CC  AGA G AACGGG UCA CUau    u
cGU  -C   U A      -   -    uaau

Annotation confidence Not enough data

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Genome context

Unmapped58: 27860-27918 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from tca-mir-3836j

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-3836j-3p

Accession	MIMAT0045626
Description	Tribolium castaneum tca-miR-3836j-3p mature miRNA
Sequence	37 - UCACUGGGCAAAGUAGACCCUG - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96