Stem-loop tca-mir-3836e

Accession

MI0037364

Description

Tribolium castaneum tca-mir-3836e precursor miRNA

Sequence

auuuucugcUUGGUCUAUCCUUGCUUUGGUUGAUauuuauuuaauuaUCACUGGGCAAAGUAGACCUUGcaguaguu
.....((((..(((((((..((((((.(((.((((..........))))))))))))).)))))))..)))).....

Structure

auuuu    UU       CC      U   U    uuua 
     cugc  GGUCUAU  UUGCUU GGU GAUa    u
     ||||  |||||||  |||||| ||| ||||     
     gacG  CCAGAUG  AACGGG UCA CUau    u
uugau    UU       -A      -   -    uaau 

Annotation confidence Not enough data

Genome context

ChLG2: 2686164-2686240 [+]

Clustered miRNAs

21 other miRNAs are < 10 kb from tca-mir-3836e

Mature tca-miR-3836e-5p

• Accession: MIMAT0045497
• Description: Tribolium castaneum tca-miR-3836e-5p mature miRNA
• Sequence: 10 - UUGGUCUAUCCUUGCUUUGGUUGAU - 34
• Evidence: experimental ; Illumina [1]

Mature tca-miR-3836e-3p

• Accession: MIMAT0045498
• Description: Tribolium castaneum tca-miR-3836e-3p mature miRNA
• Sequence: 48 - UCACUGGGCAAAGUAGACCUUG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96