miRBase entry: tca-mir-11617e

Stem-loop tca-mir-11617e

Accession

MI0037439

Description

Tribolium castaneum tca-mir-11617e precursor miRNA

Sequence

AGUUGGCAUGGAUGGUACUGUAuagaucauaguaauuauaguacuuucuauggcaacuua
(((((.((((((.(((((((((..............))))))))).)))))).)))))..

Structure

--     G      U         uagauc 
  AGUUG CAUGGA GGUACUGUA      a
  ||||| |||||| |||||||||       
  ucaac guaucu ucaugauau      u
au     g      u         uaauga

Annotation confidence Not enough data

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Genome context

ChLG2: 1334429-1334488 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from tca-mir-11617e

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tca-miR-11617e-5p

Accession	MIMAT0045599
Description	Tribolium castaneum tca-miR-11617e-5p mature miRNA
Sequence	1 - AGUUGGCAUGGAUGGUACUGUA - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 26518483
MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"Genome Res (2016) 26:85-96