Stem-loop tca-mir-11617d-1

Accession

MI0037438

Description

Tribolium castaneum tca-mir-11617d-1 precursor miRNA

Sequence

aGUUGGCAUGGGUGGUACUAUAuauaucauaguaauuauaguacuuucuauggcaacuua
(((((.((((((.(((((((((..(((....)))..))))))))).)))))).)))))..

Structure

--     G      U         ua   c 
  aGUUG CAUGGG GGUACUAUA  uau a
  ||||| |||||| |||||||||  |||  
  ucaac guaucu ucaugauau  aug u
au     g      u         ua   a 

Annotation confidence Not enough data

Genome context

ChLG2: 1363611-1363670 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from tca-mir-11617d-1

Mature tca-miR-11617d-5p

• Accession: MIMAT0045598
• Description: Tribolium castaneum tca-miR-11617d-5p mature miRNA
• Sequence: 2 - GUUGGCAUGGGUGGUACUAUA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96