Stem-loop tca-mir-11622

Accession

MI0037379

Description

Tribolium castaneum tca-mir-11622 precursor miRNA

Sequence

2106 reads, 19.0 reads per million, 32 experiments

acuaaaucaguugaugUAAAGGAAUUGCAGGAUUGAAAugucugcagcguuUUAGUCUUGUAAAUUCCUUUGGguuuacugauaaaaa
.....((((((.(((.(((((((((((((((((((((((((.....))))))))))))))).)))))))))).))).)))))).....

Structure

acuaa      u   g          -               c 
     aucagu gau UAAAGGAAUU GCAGGAUUGAAAugu u
     |||||| ||| |||||||||| ||||||||||||||| g
     uaguca uug GUUUCCUUAA UGUUCUGAUUuugcg c
aaaaa      u   G          A               a 

Annotation confidence High

Genome context

ref|NC_007418.3|: 1789919-1790006 [-]

Mature tca-miR-11622-5p

• Accession: MIMAT0045517
• Description: Tribolium castaneum tca-miR-11622-5p mature miRNA
• Sequence: 17 - UAAAGGAAUUGCAGGAUUGAAA - 38
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11622-3p

• Accession: MIMAT0045518
• Description: Tribolium castaneum tca-miR-11622-3p mature miRNA
• Sequence: 52 - UUAGUCUUGUAAAUUCCUUUGG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96