Stem-loop mes-MIR397b

Accession

MI0037906

Description

Manihot esculenta mes-MIR397b precursor miRNA

Literature search

2 open access papers mention mes-MIR397b
(5 sentences)

Sequence

aauaagauuccagauuggagaaacaUCAUUGAGUGCAGCGUUGAUGaauucccugcaauuuucuggaauuuggggaugauuucaccagcgcugcauucaaucauguuuuuucacuuacuggaaacguugc
.......((((((..(((((((((((.((((((((((((((((.((((.((((((.(((((....)))))))))))....)))).)))))))))))))))).)))))))))))....)))))).......

Structure

aauaaga      --au           C                A    ---u      c     u 
       uuccag    uggagaaacaU AUUGAGUGCAGCGUUG UGaa    ucccug aauuu c
       ||||||    ||||||||||| |||||||||||||||| ||||    |||||| |||||  
       aagguc    acuuuuuugua uaacuuacgucgcgac acuu    aggggu uuaag u
cguugca      auuc           c                c    uagu      -     g 

Annotation confidence Not enough data

Genome context

scaffold09000: 647747-647876 [-]

Mature mes-miR397b

• Accession: MIMAT0045970
• Description: Manihot esculenta mes-miR397b mature miRNA
• Sequence: 26 - UCAUUGAGUGCAGCGUUGAUG - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26822616
   High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs
   Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN
   BMC Genomics (2016) 17:85